wise-2.4.1-1 RPM for x86_64

From OpenMandriva Cooker for x86_64 / main / release

Wise2 is a package focused on comparisons of biopolymers, commonly DNA and
protein sequence. Wise2's particular forte is the comparison of DNA sequence
at the level of its protein translation. This comparison allows the simulta-
neous prediction of say gene structure with homology based alignment.

The Wise2 package was principally written by Ewan Birney, who wrote the main
genewise and estwise programs. The protein comparison database search program
was written by Richard Copley using the underlying Wise2 libraries.
Wise2 also uses code from Sean Eddy for reading HMMs and
for Extreme value distribution fitting.

Provides

• wise
• config(wise)
• wise(x86-64)

Requires

• config(wise) = 2.4.1-1
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.3)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_2.7)(64bit)
• libglib-2.0.so.0()(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.2.5)(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)

License

GPL

Changelog

* Wed Dec 08 2010 Oden Eriksson <oeriksson@mandriva.com> 2.2.0-9mdv2011.0
  + Revision: 615450
  - the mass rebuild of 2010.1 packages
* Mon Mar 15 2010 Eric Fernandez <zeb@mandriva.org> 2.2.0-8mdv2010.1
  + Revision: 519888
  - rebuild
* Wed Aug 19 2009 Eric Fernandez <zeb@mandriva.org> 2.2.0-7mdv2010.0
  + Revision: 417945
  - compilation fix
* Wed May 06 2009 Eric Fernandez <zeb@mandriva.org> 2.2.0-6mdv2010.0
  + Revision: 372448
  - rebuild
* Thu Jan 03 2008 Olivier Blin <oblin@mandriva.com> 2.2.0-5mdv2008.1
  + Revision: 140932
  - restore BuildRoot
  
    + Thierry Vignaud <tv@mandriva.org>
      - kill re-definition of %buildroot on Pixel's request

Files

/etc/profile.d/wise.csh
/etc/profile.d/wise.sh
/usr/bin/dba
/usr/bin/dnal
/usr/bin/estwise
/usr/bin/estwisedb
/usr/bin/genewise
/usr/bin/genewisedb
/usr/bin/promoterwise
/usr/bin/psw
/usr/bin/pswdb
/usr/bin/scanwise
/usr/bin/sywise
/usr/share/doc/wise
/usr/share/doc/wise/LICENSE
/usr/share/doc/wise/README
/usr/share/doc/wise/docs
/usr/share/doc/wise/docs/README
/usr/share/doc/wise/docs/apiend.tex
/usr/share/doc/wise/docs/appendix.tex
/usr/share/doc/wise/docs/dynamite.tex
/usr/share/doc/wise/docs/genewise21.eps
/usr/share/doc/wise/docs/genewise6.eps
/usr/share/doc/wise/docs/gettex.pl
/usr/share/doc/wise/docs/makefile
/usr/share/doc/wise/docs/papers
/usr/share/doc/wise/docs/papers/alignment.bib
/usr/share/doc/wise/docs/papers/promoterwise.tex
/usr/share/doc/wise/docs/wise2.tex
/usr/share/doc/wise/docs/wise2api.tex
/usr/share/doc/wise/docs/wise3arch.tex
/usr/share/wise
/usr/share/wise/BLOSUM30.bla
/usr/share/wise/BLOSUM45.bla
/usr/share/wise/BLOSUM62.bla
/usr/share/wise/BLOSUM80.bla
/usr/share/wise/aa.rnd
/usr/share/wise/cb.tmf
/usr/share/wise/codon.martian
/usr/share/wise/codon.table
/usr/share/wise/gene.stat
/usr/share/wise/gon120.bla
/usr/share/wise/gon160.bla
/usr/share/wise/gon200.bla
/usr/share/wise/gon250.bla
/usr/share/wise/gon350.bla
/usr/share/wise/human.gf
/usr/share/wise/human.gp
/usr/share/wise/human.stats
/usr/share/wise/idenity.bla
/usr/share/wise/methods
/usr/share/wise/pb.gf
/usr/share/wise/pombe.gf
/usr/share/wise/tm.pri
/usr/share/wise/wag55
/usr/share/wise/wag65
/usr/share/wise/wag75
/usr/share/wise/wag85
/usr/share/wise/wise.2
/usr/share/wise/wise.per
/usr/share/wise/worm.gf

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Fabrice Bellet, Tue Dec 24 23:03:10 2024