fastx_toolkit-0.0.14-32.fc39 RPM for aarch64

From Fedora 39 for aarch64 / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(aarch-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• glibc >= 2.37.9000-17
• ld-linux-aarch64.so.1()(64bit)
• ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-32
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-31
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-29
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-28
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/18
/usr/lib/.build-id/18/e21c2b3b92ba30e0597e8235e1e71816b1e879
/usr/lib/.build-id/2b
/usr/lib/.build-id/2b/1aec369ea0c8dd82d0321acd04a966cb641184
/usr/lib/.build-id/3d
/usr/lib/.build-id/3d/c4d4aa5323e22c1f860c574fcfdce544b4933a
/usr/lib/.build-id/40
/usr/lib/.build-id/40/7923d1a4ed197c7302bb36169e3aaae302eb05
/usr/lib/.build-id/44
/usr/lib/.build-id/44/88093709235d9c7d30bb1fe7aed7482a8128a9
/usr/lib/.build-id/4a
/usr/lib/.build-id/4a/06bc4b3b429a1f845fbe36527acd7ee920e785
/usr/lib/.build-id/4f
/usr/lib/.build-id/4f/bbfd0f3fc0874b1c02fec65f69a805b48cb2bf
/usr/lib/.build-id/8e
/usr/lib/.build-id/8e/e06dd03b521a911314ccf82706a2b5a33e43f2
/usr/lib/.build-id/bd
/usr/lib/.build-id/bd/6d26983b7794307332c0b2933158cfdb50f508
/usr/lib/.build-id/c2
/usr/lib/.build-id/c2/b2aa3a6358566f2aca038e6745397fbea4257f
/usr/lib/.build-id/c8
/usr/lib/.build-id/c8/059d2c4f96331d88862aa2769e0368a3a93ff4
/usr/lib/.build-id/d7
/usr/lib/.build-id/d7/87a7323151a81c25e104326f5cb610dbba15b4
/usr/lib/.build-id/e6
/usr/lib/.build-id/e6/7de972457bc794e5d0c48c59851606247acfa1
/usr/lib/.build-id/ee
/usr/lib/.build-id/ee/8756ce07de9293cf773c8690927a80b37e3acb
/usr/lib/.build-id/f1
/usr/lib/.build-id/f1/fce7765fd75cffd3e1a8fda055e78801912ff0
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Wed Apr 10 02:20:47 2024