fastx_toolkit-0.0.14-30.fc37 RPM for s390x

From Fedora 37 for s390x / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(s390-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.2)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-29
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-28
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-27
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Wed Aug 26 2020 Jeff Law <law@redhat.com> - 0.0.14-26
  - No longer force C++11 mode
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-25
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/1c
/usr/lib/.build-id/1c/ebb65131002176b9e096dd3bb7110b569c72d2
/usr/lib/.build-id/23
/usr/lib/.build-id/23/ad2e9bafd47fe046b440a7764aa5ffdc13f189
/usr/lib/.build-id/28
/usr/lib/.build-id/28/f760396ddfc47675e41c6105074b37ebfff920
/usr/lib/.build-id/33
/usr/lib/.build-id/33/90af9c4ccde175aa18420788e3d477e4101b07
/usr/lib/.build-id/40
/usr/lib/.build-id/40/7841ad5cfed3a4b07cd0ad7600d945d4ff1f33
/usr/lib/.build-id/47
/usr/lib/.build-id/47/84aa41638f3d7cba3ff75b08571466a80441d5
/usr/lib/.build-id/5a
/usr/lib/.build-id/5a/a15b679f71c5d01111d9877e8e6dede177e6c2
/usr/lib/.build-id/6b
/usr/lib/.build-id/6b/694c295a14a67acd475b84b4ebb9d4df167a7c
/usr/lib/.build-id/88
/usr/lib/.build-id/88/3336b7dcd90881f8f42e10fefe776dab14055f
/usr/lib/.build-id/88/e50b257221463f86eb0220163b4178a8e75680
/usr/lib/.build-id/90
/usr/lib/.build-id/90/a10ff4764d0f7079df1118442838e6574444f9
/usr/lib/.build-id/b2
/usr/lib/.build-id/b2/c67f62e1ec98de239512d92439cfc9ef6635ba
/usr/lib/.build-id/de
/usr/lib/.build-id/de/d92e54395cffe1b3fb9d8ae7f182768b4f38e2
/usr/lib/.build-id/df
/usr/lib/.build-id/df/31975e4243e4ee9a8a637a61662cb9ae506530
/usr/lib/.build-id/e6
/usr/lib/.build-id/e6/7b294caefbb926c5d12e2274123803a96ea8a2
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Tue Apr 9 21:25:34 2024