fastx_toolkit-0.0.14-30.fc37 RPM for ppc64le

From Fedora 37 for ppc64le / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(ppc-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.32)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-29
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-28
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-27
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Wed Aug 26 2020 Jeff Law <law@redhat.com> - 0.0.14-26
  - No longer force C++11 mode
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-25
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/0c
/usr/lib/.build-id/0c/4c2dc9110604a0ce8c5642222c84b947740b91
/usr/lib/.build-id/12
/usr/lib/.build-id/12/65ba2b6f6461cb10b46753031b429631835b13
/usr/lib/.build-id/20
/usr/lib/.build-id/20/f2bc71cc35028c37ed38278e14c956d496b616
/usr/lib/.build-id/2a
/usr/lib/.build-id/2a/c6c5f8ea601efe50201f003053f3a662831fb4
/usr/lib/.build-id/3e
/usr/lib/.build-id/3e/1689197fed1e829b308a185417901191774952
/usr/lib/.build-id/3e/cfe6589c1eaa730394f6c28a984d4878d75d95
/usr/lib/.build-id/5d
/usr/lib/.build-id/5d/9d19eba4aeafe0ce2e3bbeef84a609029a95df
/usr/lib/.build-id/74
/usr/lib/.build-id/74/2aa9dc2af9a27d49444503d0822bf37218f5fe
/usr/lib/.build-id/7b
/usr/lib/.build-id/7b/7beac5e26ff2bba499f79249f0159f8f8077aa
/usr/lib/.build-id/7e
/usr/lib/.build-id/7e/13257084c5a229ddd5132f8455ed67aa42b82e
/usr/lib/.build-id/9f
/usr/lib/.build-id/9f/77f6243dfa60691cd2909284f3a5859208c697
/usr/lib/.build-id/cc
/usr/lib/.build-id/cc/91a659c235c0811e5934297c89a43feb377cc9
/usr/lib/.build-id/ce
/usr/lib/.build-id/ce/4435a17b4d8f27044e9802b63514923f02e21a
/usr/lib/.build-id/d0
/usr/lib/.build-id/d0/3283208cc972c14c020f27939534cbe5b93944
/usr/lib/.build-id/e1
/usr/lib/.build-id/e1/29c33abd9f05c667a19ef058a06b65eaac7ab3
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Tue Apr 9 21:14:35 2024