Index index by Group index by Distribution index by Vendor index by creation date index by Name Mirrors Help Search

bcftools-1.9-2.fc32 RPM for x86_64

From Fedora 32 for x86_64 / b

Name: bcftools Distribution: Fedora Project
Version: 1.9 Vendor: Fedora Project
Release: 2.fc32 Build date: Tue Jan 28 13:49:19 2020
Group: Unspecified Build host: buildvm-18.phx2.fedoraproject.org
Size: 2006108 Source RPM: bcftools-1.9-2.fc32.src.rpm
Packager: Fedora Project
Url: https://www.htslib.org/
Summary: Tools for genomic variant calling and manipulating VCF/BCF files
BCFtools is a set of utilities that manipulate genomic variant calls in the
Variant Call Format (VCF) and its binary counterpart (BCF). All commands work
transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.

(This BCFtools includes the polysomy subcommand, which is implemented using
the GNU Scientific Library. Hence this package is licensed according to the
GNU General Public License, rather than the MIT license used when BCFtools
is built without the polysomy subcommand.)

Provides

Requires

License

GPLv3+

Changelog

* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.9-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Tue Nov 19 2019 Jun Aruga <jaruga@redhat.com> - 1.9-1
  - Exclude a CPU architecture s390x.
  - Add Conflicts tag for samtools < 1.0.
  - Align the field delimiter as 1 space.
  - Use additional RPM macros for Source0.
  - Add a logic to check if bcftools is built with system htslib.
  - Update comments for license.
* Wed Nov 06 2019 John Marshall <jmarshall@users.sourceforge.net> - 1.9-1
  - New spec file for bcftools, now separate from samtools (#1767792).
  - Backported Python 3 and configure patches from later upstream development.

Files

/usr/bin/bcftools
/usr/bin/color-chrs.pl
/usr/bin/guess-ploidy.py
/usr/bin/plot-roh.py
/usr/bin/plot-vcfstats
/usr/bin/run-roh.pl
/usr/bin/vcfutils.pl
/usr/lib/.build-id
/usr/lib/.build-id/01
/usr/lib/.build-id/01/689b509feb65f3bfef5d6aaac7326b492d0001
/usr/lib/.build-id/28
/usr/lib/.build-id/28/37a1744147d5d14fea19427f73ad81d6a6e89d
/usr/lib/.build-id/2d
/usr/lib/.build-id/2d/cd8eab5b4f1e36b1e548cb68a05177c60a99cb
/usr/lib/.build-id/36
/usr/lib/.build-id/36/b0ee26df3a572d53e5fb7cb6c443ab23fdd280
/usr/lib/.build-id/36/b1c08d3eeca95aa17bbf77a37abbbe04466602
/usr/lib/.build-id/41
/usr/lib/.build-id/41/b9164131912d851d4cb90a0d3801c8c3840a08
/usr/lib/.build-id/42
/usr/lib/.build-id/42/133df7e5ed5e773d0f6f4700472a7c9d4c2814
/usr/lib/.build-id/67
/usr/lib/.build-id/67/0a0e44b59c678d98551cf8d0de1646520cd46e
/usr/lib/.build-id/70
/usr/lib/.build-id/70/b1085667ce1076d4bbe4d6f70825ca8b53e4da
/usr/lib/.build-id/7b
/usr/lib/.build-id/7b/f1fbff6d4f3b386d56f5b9be2eca5ee615d7b7
/usr/lib/.build-id/7c
/usr/lib/.build-id/7c/4a4187f2259eb09639e6dad771e8beae0584a5
/usr/lib/.build-id/7d
/usr/lib/.build-id/7d/ccc3c26a15a28006ae55f97d9af32ade5ad033
/usr/lib/.build-id/81
/usr/lib/.build-id/81/12cedc1267b243745b6573be4663bf5fb9e924
/usr/lib/.build-id/89
/usr/lib/.build-id/89/83af3e567ffa0baa3e6d62ba9577df50fff0db
/usr/lib/.build-id/98
/usr/lib/.build-id/98/c43450fb46349618bdbe66a89e0e4e9147f45b
/usr/lib/.build-id/9d
/usr/lib/.build-id/9d/b030692af2c66ab104cd498ff9efe85c3b6d7b
/usr/lib/.build-id/ac
/usr/lib/.build-id/ac/f461ec5f081a7957427c681cde9ea1b09a31a6
/usr/lib/.build-id/b8
/usr/lib/.build-id/b8/328a799f3d36ae919e5182a3493bd3029958b3
/usr/lib/.build-id/bd
/usr/lib/.build-id/bd/a5c517fe83814cacd9372e8ba29cf2f49289e8
/usr/lib/.build-id/cd
/usr/lib/.build-id/cd/0d4190ece6f0f0e656a5b3bb73683673192abf
/usr/lib/.build-id/d0
/usr/lib/.build-id/d0/150d23928b74cc5d1b6c486415959be22d9a16
/usr/lib/.build-id/d9
/usr/lib/.build-id/d9/4f6ed9ff294e6fd784b70352668f763e0f4586
/usr/lib/.build-id/de
/usr/lib/.build-id/de/7eefc59256701fa250640586b17f99bba5c7b9
/usr/lib/.build-id/e0
/usr/lib/.build-id/e0/58da740dfeb6eb38c0969620fa61a46c0a5d00
/usr/lib/.build-id/ec
/usr/lib/.build-id/ec/b95b26088ba436f783ac5aca8e66647dc0a54d
/usr/lib/.build-id/ed
/usr/lib/.build-id/ed/3d5890f9ae1383b81520b82eabd20f88a13e75
/usr/lib/.build-id/f7
/usr/lib/.build-id/f7/70990e93c4be89814cdc45c95e8a05d57cfe91
/usr/lib/.build-id/fd
/usr/lib/.build-id/fd/44fcd9559c823cd2e10b1ec7e4012588841cfc
/usr/lib/.build-id/fd/9bf37377edecbeae598fd1e5f684361c46dc40
/usr/libexec/bcftools
/usr/libexec/bcftools/GTisec.so
/usr/libexec/bcftools/GTsubset.so
/usr/libexec/bcftools/ad-bias.so
/usr/libexec/bcftools/af-dist.so
/usr/libexec/bcftools/check-ploidy.so
/usr/libexec/bcftools/check-sparsity.so
/usr/libexec/bcftools/color-chrs.so
/usr/libexec/bcftools/contrast.so
/usr/libexec/bcftools/counts.so
/usr/libexec/bcftools/dosage.so
/usr/libexec/bcftools/fill-AN-AC.so
/usr/libexec/bcftools/fill-from-fasta.so
/usr/libexec/bcftools/fill-tags.so
/usr/libexec/bcftools/fixploidy.so
/usr/libexec/bcftools/fixref.so
/usr/libexec/bcftools/frameshifts.so
/usr/libexec/bcftools/guess-ploidy.so
/usr/libexec/bcftools/impute-info.so
/usr/libexec/bcftools/isecGT.so
/usr/libexec/bcftools/mendelian.so
/usr/libexec/bcftools/missing2ref.so
/usr/libexec/bcftools/prune.so
/usr/libexec/bcftools/setGT.so
/usr/libexec/bcftools/smpl-stats.so
/usr/libexec/bcftools/split.so
/usr/libexec/bcftools/tag2tag.so
/usr/libexec/bcftools/trio-stats.so
/usr/libexec/bcftools/trio-switch-rate.so
/usr/share/doc/bcftools
/usr/share/doc/bcftools/AUTHORS
/usr/share/doc/bcftools/NEWS
/usr/share/licenses/bcftools
/usr/share/licenses/bcftools/LICENSE
/usr/share/man/man1/bcftools.1.gz


Generated by rpm2html 1.8.1

Fabrice Bellet, Sat Oct 9 16:45:41 2021